poolHelper - Simulates Pooled Sequencing Genetic Data
Simulates pooled sequencing data under a variety of conditions. Also allows for the evaluation of the average absolute difference between allele frequencies computed from genotypes and those computed from pooled data. Carvalho et al., (2022) <doi:10.1101/2023.01.20.524733>.
Last updated 2 years ago
4.18 score 1 dependents 3 scripts 231 downloadspoolABC - Approximate Bayesian Computation with Pooled Sequencing Data
Provides functions to simulate Pool-seq data under models of demographic formation and to import Pool-seq data from real populations. Implements two ABC algorithms for performing parameter estimation and model selection using Pool-seq data. Cross-validation can also be performed to assess the accuracy of ABC estimates and model choice. Carvalho et al., (2022) <doi:10.1111/1755-0998.13834>.
Last updated 2 years ago
3.70 score 1 stars 3 scripts 150 downloads